The Colorectal Cancer challenge

Colorectal cancer (CRC) presents formidable challenges in therapeutic development, driven by significant tumor heterogeneity, complex resistance mechanisms, and an alarming rise in early-onset disease. 

Finding the right laboratory partner becomes essential for navigating this challenging landscape, where comprehensive molecular profiling, advanced resistance monitoring, and adaptive testing strategies are crucial for developing therapies that can overcome the inherent complexity and therapeutic resistance characteristic of this prevalent disease. 

Here’s an overview of the unique solid tumour offerings at HBRI:

Unique offerings for your Colorectal Cancer trial

Dna,Isolated,On,White.,3d,Render
DNA / RNA

NGS, oncopanels,
broad panels, custom panels
RNA seq
Single-gene
ctDNA-based panels
ddPCR, qPCR
Whole exome / whole genome
HLA typing
TCR / BCR seq
NanoString®
SNP-array
DNA/RNA extraction
Streck Cell-Free DNA BCT®
PaxGene®, Qiamp Kits

Routine/Safety

Coagulation
Hematology
Biochemistry
Urinalysis
Pregnancy test
COVID test
Serology
Thyroid function
HbA1c
Protein electrophoresis (sPEP.
UPER SELC)
Tumor markers
Drug screens

Antibodies,,Immunoglobulin,Ig,Proteins,3d,Medical,Background.,Immune,System,,Igm,
Protein

Large portfolio of ligand
binding assays
ELISA
ELLA
ECLIA
MSD
ELISpot
FluroSpot
PK/ADA/Nab
Multiplex cytokine profiling (37-plex)

Cell

FCM
Spectral flow (Cytek Aurora)
Immunophenotyping (including intra-cell markers)
Receptor occupancy
MRD detection (for MM only)
CAR T cell enumeration
CAR T cell phenotyping
Intracellular cytokine detection
PBMC isolation
BMMC isolation
Optical genome mapping, our next-generation cytogenetics
PKIADA/Nab

Tissue

Multiplex / simplex IHC
250+ biomarkers/protocols
Full histopath service
Halo®, Visiopharm®, Al experiments
Board certified pathologists
Large biobank
Strong immuno-oncology simplex & multiplex panels
Spatial analysis of the tumor microenvironment
NanoString® GeoMx, FISH, ISH

We recommend starting engagement with our scientific team early, such as at the protocol design phase, for optimal results. We’re ready to discuss your needs.

Biomarkers in Colorectal Cancer

Intra-tumoral heterogeneity poses a major challenge for CRC treatment, as different cell subpopulations may respond variably or even resist therapy and promote recurrence. 

With essential biomarkers including KRAS, NRAS, BRAF, HER2, NTRK, RET, and critical markers like microsatellite instability (MSI), mismatch repair (MMR) status, and tumor mutational burden (TMB), the molecular complexity demands sophisticated testing approaches that can adapt to evolving resistance patterns. 

Understanding which biomarkers to test and when becomes crucial for treatment success, requiring laboratory partners with comprehensive expertise across multiple testing platforms.

Here’s how our testing capabilities support your lung cancer trials:

HBRI supports Colorectal Cancer biomarker guidelines

CRC Biomarkers Most Commonly Deployed (1-4) HBRI NGS HBRI IHC HBRI FISH
KRAS NGS MEK1
NRAS NGS
BRAF NGS
HER2 IHC, FISH
NTRK IHC, FISH, NGS
RET IHC, FISH, NGS
CEA IHC
TMB PCR, NGS
MSI PCR, NGS
MMR IHC

1.NCCN guidelines 2024; 2.Bebb et al. Curr Oncol 2021; *HBRI Data In-house mostly available through the ACTOnco®/Cerba France/Cerba US NGS panels or CR Montpellier (IHC) or Cerba France (FISH); IHC=immunohistochemistry; NGS=next-generation sequencing; FISH=fluorescence in situ hybridization; CEA=carcinoembryonic antigen determination; TMB=tumor mutation burden; MSI=microsatellite instability; dMMR= mismatch repair deficient

This comprehensive biomarker landscape requires seamless integration of NGS, IHC, and FISH methodologies to provide the complete molecular picture needed for precision treatment decisions in colorectal cancer.

 

We have ~160 targets/protocols/clones (clones and validation status available upon request)

ABCC4 CD22 Collagen I HER-2 LAG-3 Pan-TRK TCRgd
Adipophilin CD25 Collagen III HIS Lambda PD-1 TIM-3
ALK CD3 Collagen VII HLA-DR LIF PD-L1 Tissue Factor
ALPP CD30 Connexin 43 HPGD MASH1 PHH3 TNFa
AMH CD31 CTLA-4 HulgG MEK-1 PMS2 TNFR2
aSMA CD38 CXCL12 IDO MLH-1 PR TNFRSF14
BRAF V600E CD39 DLL3 IFNγ MSH2 PTK7/CCK4 TROP2
BrdU CD4 E-Cadherin IL-10 MSH6 RET Vimentin
CAIX CD44 EGFR IL-13 Muc5ac ROR1 VRK1
CC-10 CD45 Elastin IL-7 Muc5b ROS1 XBP-1s
CCR8 CD45RO EP4R IL-1a NCR1/NKp46 SCN5A YAP
CD11B CD47 EpCAM IL-1b Nectin-1 SIRPa
CD123 CD52 ER IL-1RAP Nectin-4 SKN1
CD138 CD56 FAP IL-22 Neutrophil Elastase SLCO2A1/PGT
CD155 CD68 FGFR3 IL-23 OX40 SLFN11
CD16 CD8 FoxA3 IL-33 OX40L SPDEF
CD163 CD99 FoxP3 IL-34 p16 Taz
CD163 CK16 GM-CSF INSM1 p53 TCF4
CD19 Cleaved Caspase 3 Granzyme B Kappa Pan-Keratin TCL1
CD20 cMet H. Pylori Ki-67 Pan-TEAD TCR Vy9

*Validation levels of biomarkers will vary depending on intended use; This list is not exhaustive – contact us for further information on a specific biomarker or panel; Updated 13 May 2025 from the CRM test menu

We have ~30 panels (clones and validation status available upon request)

Adipopphilin/CD138/CD45 CD20/XBP1s mPGES-1/PTGES
BCMA/CXCR3/CD20/CD138/CD3 CD68/CD163 NKp46/CD8/Granzyme B/TCRyõ
CCR8/TNFR2 CD68/CD163/PD-L1/EP4R/PanCK PanCK [AE1/AE3)
CD3/CD8/FoxP3 CD68/PD-L1/PanCK Panel M1/M2 (PSTAT1/cMAF/CD68/CD163)
CD3/CD8/FoxP3/EP4R/PanCK CK8/CK18 TCF4/CD123
CD3/CD11b/CD47/SIRPa Elastin/Vimentin
CD3 /CD16/CD56 EP4R/Cox2/mPGES-1/PanCK
CD3/FoxP3 Ki-67/Granzyme B/CD8
CD4/GATA-3/CD3/FoxP3 Langerin/CD1a
CD8/CD39 MCP-1/CCL2

*Validation levels of biomarkers will vary depending on intended use; This list is not exhaustive – contact us for further information on a specific biomarker or panel; Updated 13 May 2025 from the CRM test menu

Our experience in the Colorectal Cancer landscape

DNA

638

NGS broad-panel assay with our OncoSign 600+

50

Genes with our OncoSign ctDNA panel

250+

Histopathology analysis with markers such as HER2, MSI and MMR run in CLIA accredited laboratories

We recommend starting engagement with our scientific team early, such as at the protocol design phase, for optimal results. We’re ready to discuss your needs.